| peptide_group | N |
| genome_location_chr | chr1|-|241512129|241512139|241513596|241513614 |
| protein_id_best | ALL_00332725.p1 |
| gene_id_best | XLOC_015081 |
| psms_q_value_min | 0.00008 |
| peptides_q_value_min | 0.000952 |
| relaxed | 1 |
| stringent | 0 |
| strictest | 0 |
| relaxed_PepQuery | 1 |
| stringent_PepQuery | 0 |
| strictest_PepQuery | 0 |
| GENCODE_location_group | All_transcript_coding |
| genome_loc_count | 1 |
| spectrums_count_relaxed | 28 |
Intronic CRISPR repair in LZTR1-deficient iPSC-cardiomyocytes from Noonan syndrome patients reveals new treatment options
instruments: Q Exactive
| IDshort | activationMethod | #spectrum | #PSM | #PSM(q<0.01) | scan ID |
|---|---|---|---|---|---|
| 1AEP | HCD | 19060 | 18225 | 7178 | 3043 |
| 1AF1 | HCD | 19916 | 19149 | 8240 | 2877 |
| 1AFD | HCD | 19708 | 18934 | 8135 | 2781 |
| 1AH2 | HCD | 19088 | 17936 | 3714 | 2905 |
| 1AJ2 | HCD | 18203 | 17263 | 3969 | 2997 |
| 1AKQ | HCD | 18605 | 17405 | 2358 | 2969 |
| 1AL2 | HCD | 19726 | 18706 | 4214 | 3242 |
| 1AM2 | HCD | 19227 | 18050 | 4155 | 3287 |
| 1AME | HCD | 19776 | 18732 | 5085 | 3250 |
| 1AN2 | HCD | 19214 | 18154 | 5868 | 3164 |
| 1ANE | HCD | 19294 | 18120 | 5758 | 3223 |
Human brain LC-MS/MS - Brain Citrullination Patterns and T Cell Reactivity of Cerebrospinal Fluid-Derived CD4+ T Cells in Multiple Sclerosis
instruments: Q Exactive
| IDshort | activationMethod | #spectrum | #PSM | #PSM(q<0.01) | scan ID |
|---|---|---|---|---|---|
| 1L1Z | HCD | 30994 | 28898 | 10345 | 1900 |
Note:
PRIDE changed the names for some raw files. For example, file with link "http://ftp.ebi.ac.uk/pride/data/archive/2020/06/PXD019483/20180920_QX3_JoMu_SA_LC12-7_uPAC200cm_HeLa+iRT_2-1verdunnt_F7.raw" were changed to "http://ftp.ebi.ac.uk/pride/data/archive/2020/06/PXD019483/20180920_QX3_JoMu_SA_LC12-7_uPAC200cm_HeLaiRT_2-1verdunnt_F7.raw". You may need to find the correct url by visiting the Project link directly. In this example, the project link is "http://ftp.ebi.ac.uk/pride/data/archive/2020/06/PXD019483"